Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | CD58_RS11805 | Not Available | Negative | 2699709 - 2700392 | 25431.8 |
| cyanide-forming glycine dehydrogenase subunit hcna | CD58_RS11810 | Not Available | Positive | 2700668 - 2700994 | 12096.7 |
| cyanide-forming glycine dehydrogenase subunit hcnb | CD58_RS11815 | Not Available | Positive | 2700991 - 2702400 | 50654.3 |
| cyanide-forming glycine dehydrogenase subunit hcnc | CD58_RS11820 | Not Available | Positive | 2702393 - 2703655 | 45849.1 |
| glutathione s-transferase | CD58_RS11825 | Not Available | Negative | 2703850 - 2704461 | 22296.0 |
| murr/rpir family transcriptional regulator | CD58_RS11830 | Not Available | Negative | 2704497 - 2705420 | 34378.0 |
| bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2- deoxyphosphogluconate aldolase | CD58_RS11835 | Not Available | Positive | 2705734 - 2707671 | 71305.6 |
| myo-inosose-2 dehydratase | CD58_RS11840 | Not Available | Positive | 2707830 - 2708720 | 32376.5 |
| 5-deoxy-glucuronate isomerase | CD58_RS11845 | Not Available | Positive | 2708717 - 2709526 | 29787.0 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | CD58_RS11850 | Not Available | Positive | 2709561 - 2711063 | 53290.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
