Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oprd family porin | CD58_RS11750 | Not Available | Negative | 2685879 - 2687108 | 44847.2 |
| tetr/acrr family transcriptional regulator | CD58_RS11760 | Not Available | Positive | 2687723 - 2688343 | 23690.4 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | CD58_RS11765 | Not Available | Negative | 2688487 - 2689761 | 45944.0 |
| nad(p)-dependent oxidoreductase | CD58_RS11770 | Not Available | Negative | 2689762 - 2691129 | 49134.6 |
| dihydropyrimidinase | CD58_RS11775 | Not Available | Negative | 2691311 - 2692750 | 52466.1 |
| ncs1 family nucleobase:cation symporter-1 | CD58_RS11780 | Not Available | Positive | 2693359 - 2694843 | 53138.7 |
| zn-dependent hydrolase | CD58_RS11785 | Not Available | Positive | 2694994 - 2696277 | 45119.2 |
| helix-turn-helix transcriptional regulator | CD58_RS11790 | Not Available | Positive | 2696363 - 2697850 | 55257.0 |
| duf1652 domain-containing protein | CD58_RS11795 | Not Available | Positive | 2698089 - 2698337 | 9143.84 |
| sensor histidine kinase | CD58_RS11800 | Not Available | Negative | 2698346 - 2699731 | 51132.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
