Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rcnb family protein | CD58_RS11645 | Not Available | Positive | 2664818 - 2665126 | 11332.6 |
| protealysin inhibitor emfourin | CD58_RS11650 | Not Available | Negative | 2665131 - 2665454 | 12101.3 |
| m4 family metallopeptidase | CD58_RS11655 | Not Available | Negative | 2665454 - 2666515 | 38597.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | CD58_RS11660 | Not Available | Positive | 2666827 - 2667168 | 12438.1 |
| arsr/smtb family transcription factor | CD58_RS11665 | Not Available | Positive | 2667305 - 2668060 | 27061.8 |
| arac family transcriptional regulator | CD58_RS11670 | Not Available | Negative | 2668139 - 2668930 | 29513.6 |
| dmt family transporter | CD58_RS11675 | Not Available | Positive | 2669040 - 2669969 | 33048.3 |
| branched-chain amino acid aminotransferase | CD58_RS11680 | Not Available | Negative | 2670051 - 2671070 | 36979.2 |
| dihydrolipoyl dehydrogenase | CD58_RS11685 | Not Available | Negative | 2671372 - 2672757 | 48449.7 |
| dihydrolipoamide acetyltransferase family protein | CD58_RS11690 | Not Available | Negative | 2672761 - 2674032 | 45240.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
