Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS11595 | Not Available | Positive | 2647641 - 2648219 | 19902.4 |
| ig-like domain-containing protein | CD58_RS28765 | Not Available | Positive | 2648483 - 2651974 | 125113.0 |
| efflux rnd transporter permease subunit | CD58_RS11605 | Not Available | Negative | 2652163 - 2655261 | 110273.0 |
| efflux rnd transporter periplasmic adaptor subunit | CD58_RS11610 | Not Available | Negative | 2655276 - 2656433 | 41203.1 |
| response regulator transcription factor | CD58_RS11615 | Not Available | Positive | 2656699 - 2657400 | 26260.7 |
| atp-binding protein | CD58_RS11620 | Not Available | Positive | 2657404 - 2658705 | 49060.2 |
| duf1345 domain-containing protein | CD58_RS11625 | Not Available | Negative | 2658762 - 2659403 | 23189.6 |
| bifunctional nicotinamidase/pyrazinamidase | CD58_RS11630 | Not Available | Negative | 2659453 - 2660106 | 23448.2 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | CD58_RS11635 | Not Available | Positive | 2661360 - 2663438 | 74629.9 |
| dna alkylation repair protein | CD58_RS11640 | Not Available | Negative | 2663445 - 2664548 | 41162.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
