Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | CD58_RS11545 | Not Available | Negative | 2624233 - 2625543 | 47156.6 |
| sugar diacid recognition domain-containing protein | CD58_RS11550 | Not Available | Positive | 2625740 - 2626864 | 41990.9 |
| glycerate kinase | CD58_RS11555 | Not Available | Positive | 2627171 - 2628343 | 40128.7 |
| pyridoxal phosphate-dependent aminotransferase | CD58_RS11560 | Not Available | Positive | 2628770 - 2629951 | 42552.2 |
| hypothetical protein | CD58_RS11565 | Not Available | Positive | 2630241 - 2632202 | 72344.7 |
| hypothetical protein | CD58_RS11570 | Not Available | Positive | 2632308 - 2634275 | 72103.0 |
| autotransporter outer membrane beta-barrel domain-containing protein | CD58_RS11575 | Not Available | Positive | 2634581 - 2636857 | 78929.6 |
| ig-like domain-containing protein | CD58_RS28755 | Not Available | Negative | 2636932 - 2640915 | 143623.0 |
| hypothetical protein | CD58_RS28760 | Not Available | Positive | 2641142 - 2644090 | 106301.0 |
| hypothetical protein | CD58_RS11590 | Not Available | Positive | 2644300 - 2647731 | 122853.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
