Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkyl hydroperoxide reductase subunit f | CD58_RS11490 | Not Available | Positive | 2613081 - 2614643 | 55618.9 |
| lactoylglutathione lyase | CD58_RS11495 | Not Available | Negative | 2614820 - 2615341 | 19406.1 |
| duf4946 domain-containing protein | CD58_RS11500 | Not Available | Positive | 2615536 - 2616072 | 19155.0 |
| histone-like nucleoid-structuring protein, mvat/mvau family | CD58_RS11505 | Not Available | Negative | 2616165 - 2616530 | 13588.4 |
| eal domain-containing protein | CD58_RS11510 | Not Available | Negative | 2616736 - 2618298 | 57735.0 |
| lysr family transcriptional regulator | CD58_RS11515 | Not Available | Negative | 2618429 - 2619289 | 31200.9 |
| dmt family transporter | CD58_RS11525 | Not Available | Positive | 2619530 - 2620474 | 33810.6 |
| 4-hydroxyphenylpyruvate dioxygenase | CD58_RS11530 | Not Available | Positive | 2620726 - 2621802 | 40190.2 |
| eama family transporter rard | CD58_RS11535 | Not Available | Negative | 2621977 - 2622861 | 33036.8 |
| aldo/keto reductase | CD58_RS11540 | Not Available | Negative | 2623024 - 2624037 | 37234.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
