Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hdod domain-containing protein | CD58_RS00715 | Not Available | Positive | 150114 - 151328 | 44403.0 |
| ggdef domain-containing protein | CD58_RS00720 | Not Available | Negative | 151461 - 152450 | 36990.9 |
| delta-9 fatty acid desaturase desa | CD58_RS00725 | Not Available | Negative | 152742 - 153926 | 45391.1 |
| phosphodiesterase diba | CD58_RS00730 | Not Available | Positive | 154073 - 155980 | 71146.4 |
| duf6124 family protein | CD58_RS00735 | Not Available | Negative | 156139 - 156522 | 13606.0 |
| sulfur starvation response protein osca | CD58_RS00740 | Not Available | Positive | 157002 - 157184 | 6816.13 |
| sulfate abc transporter substrate-binding protein | CD58_RS00745 | Not Available | Positive | 157322 - 158335 | 36819.5 |
| sulfate abc transporter permease subunit cyst | CD58_RS00750 | Not Available | Positive | 158566 - 159384 | 29441.2 |
| sulfate abc transporter permease subunit cysw | CD58_RS00755 | Not Available | Positive | 159397 - 160266 | 31324.9 |
| sulfate/molybdate abc transporter atp-binding protein | CD58_RS00760 | Not Available | Positive | 160270 - 161259 | 37071.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
