Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general stress protein | CD58_RS29200 | Not Available | Negative | 2597802 - 2597981 | 5792.49 |
| atp-dependent clp protease proteolytic subunit | CD58_RS11400 | Not Available | Negative | 2598176 - 2598739 | 20885.8 |
| dna topoisomerase ib | CD58_RS11405 | Not Available | Negative | 2598875 - 2599912 | 39011.9 |
| molybdenum abc transporter atp-binding protein | CD58_RS11410 | Not Available | Negative | 2600154 - 2601233 | 39077.3 |
| molybdate abc transporter permease subunit | CD58_RS11415 | Not Available | Negative | 2601237 - 2601917 | 24250.2 |
| molybdate abc transporter substrate-binding protein | CD58_RS11420 | Not Available | Negative | 2601918 - 2602670 | 26738.8 |
| nad(p)h-dependent flavin oxidoreductase | CD58_RS11425 | Not Available | Negative | 2602897 - 2603970 | 38398.2 |
| gyri-like domain-containing protein | CD58_RS11430 | Not Available | Positive | 2604120 - 2604608 | 17920.7 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | CD58_RS11435 | Not Available | Negative | 2604572 - 2605645 | 38779.9 |
| dna oxidative demethylase alkb | CD58_RS11440 | Not Available | Negative | 2605734 - 2606414 | 25162.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
