Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid asymmetry maintenance protein mlab | CD58_RS11350 | Not Available | Negative | 2588888 - 2589172 | 10038.2 |
| response regulator | CD58_RS11355 | Not Available | Negative | 2589188 - 2589556 | 13044.0 |
| methyl-accepting chemotaxis protein | CD58_RS11360 | Not Available | Negative | 2589568 - 2590785 | 43180.6 |
| mate family efflux transporter | CD58_RS11365 | Not Available | Positive | 2591055 - 2592401 | 47694.3 |
| had family hydrolase | CD58_RS11370 | Not Available | Positive | 2592578 - 2593246 | 23743.7 |
| nucleotide 5'-monophosphate nucleosidase ppnn | CD58_RS11375 | Not Available | Negative | 2593372 - 2594745 | 50388.8 |
| duf3087 family protein | CD58_RS11380 | Not Available | Positive | 2594964 - 2595497 | 19702.1 |
| arsenical resistance protein arsh | CD58_RS11385 | Not Available | Negative | 2595482 - 2596177 | 26047.3 |
| arsenate reductase arsc | CD58_RS11390 | Not Available | Negative | 2596190 - 2596660 | 16756.0 |
| obap family protein | CD58_RS11395 | Not Available | Positive | 2596845 - 2597603 | 27281.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
