Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter atp-binding protein | CD58_RS11300 | Not Available | Positive | 2575274 - 2576922 | 58763.8 |
| duf1329 domain-containing protein | CD58_RS11305 | Not Available | Positive | 2576938 - 2578299 | 50224.5 |
| wd40/yvtn/bnr-like repeat-containing protein | CD58_RS11310 | Not Available | Positive | 2578368 - 2579471 | 39359.4 |
| efflux rnd transporter permease subunit | CD58_RS11315 | Not Available | Positive | 2579524 - 2581947 | 88348.8 |
| chemotaxis response regulator protein-glutamate methylesterase | CD58_RS11320 | Not Available | Negative | 2582087 - 2583160 | 38027.8 |
| chemoreceptor glutamine deamidase ched | CD58_RS11325 | Not Available | Negative | 2583163 - 2583660 | 18602.6 |
| cher family methyltransferase | CD58_RS11330 | Not Available | Negative | 2583657 - 2584493 | 31333.8 |
| chemotaxis protein chew | CD58_RS11335 | Not Available | Negative | 2584490 - 2585026 | 19005.3 |
| methyl-accepting chemotaxis protein | CD58_RS11340 | Not Available | Negative | 2585066 - 2586724 | 59306.1 |
| chemotaxis protein chea | CD58_RS11345 | Not Available | Negative | 2586758 - 2588848 | 75447.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
