Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter atp-binding protein | CD58_RS11250 | Not Available | Positive | 2564441 - 2564626 | 7145.47 |
| hypothetical protein | CD58_RS11255 | Not Available | Negative | 2564766 - 2565308 | 19220.9 |
| response regulator transcription factor | CD58_RS11260 | Not Available | Negative | 2565389 - 2566030 | 23180.4 |
| sensor histidine kinase | CD58_RS11265 | Not Available | Negative | 2566011 - 2567075 | 38337.6 |
| aaa-associated domain-containing protein | CD58_RS11270 | Not Available | Negative | 2567150 - 2568454 | 47599.4 |
| abc transporter permease subunit | CD58_RS11275 | Not Available | Negative | 2568465 - 2570072 | 58968.0 |
| hypothetical protein | CD58_RS31165 | Not Available | Positive | 2570173 - 2570358 | 6537.6 |
| sigma-54-dependent fis family transcriptional regulator | CD58_RS11285 | Not Available | Negative | 2570801 - 2572573 | 64976.2 |
| benzaldehyde dehydrogenase | CD58_RS11290 | Not Available | Positive | 2572865 - 2574340 | 51843.1 |
| coniferyl-alcohol dehydrogenase | CD58_RS11295 | Not Available | Positive | 2574405 - 2575172 | 27192.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
