Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | CD58_RS11200 | Not Available | Positive | 2554418 - 2556817 | 85421.5 |
| serine hydrolase domain-containing protein | CD58_RS11205 | Not Available | Positive | 2557079 - 2557963 | 31464.7 |
| duf805 domain-containing protein | CD58_RS11210 | Not Available | Positive | 2558271 - 2558855 | 21704.4 |
| metal abc transporter atp-binding protein | CD58_RS11215 | Not Available | Negative | 2559034 - 2559231 | 7047.32 |
| hypothetical protein | CD58_RS11220 | Not Available | Negative | 2559383 - 2559655 | 9911.07 |
| pyridoxamine 5'-phosphate oxidase family protein | CD58_RS11225 | Not Available | Positive | 2560090 - 2560722 | 23067.6 |
| c-type cytochrome | CD58_RS11230 | Not Available | Negative | 2560814 - 2561194 | 13818.9 |
| duf1349 domain-containing protein | CD58_RS11235 | Not Available | Negative | 2561361 - 2561945 | 21812.8 |
| lysr family transcriptional regulator | CD58_RS11240 | Not Available | Negative | 2562304 - 2563170 | 31897.4 |
| dmt family transporter | CD58_RS11245 | Not Available | Positive | 2563281 - 2564204 | 32726.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
