Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | CD58_RS11150 | Not Available | Positive | 2545109 - 2545804 | 25508.7 |
| hypothetical protein | CD58_RS11155 | Not Available | Negative | 2545857 - 2546816 | 35019.2 |
| tetr/acrr family transcriptional regulator | CD58_RS11160 | Not Available | Negative | 2547151 - 2547726 | 20167.1 |
| alkene reductase | CD58_RS11165 | Not Available | Positive | 2547874 - 2548995 | 39959.0 |
| sdr family nad(p)-dependent oxidoreductase | CD58_RS11170 | Not Available | Positive | 2549047 - 2549835 | 27998.6 |
| nadp-dependent oxidoreductase | CD58_RS11175 | Not Available | Positive | 2549983 - 2550981 | 35981.8 |
| phytanoyl-coa dioxygenase family protein | CD58_RS11180 | Not Available | Negative | 2551275 - 2551952 | 24664.1 |
| hypothetical protein | CD58_RS11185 | Not Available | Positive | 2552118 - 2552741 | 21971.8 |
| rna polymerase sigma factor | CD58_RS11190 | Not Available | Positive | 2552857 - 2553363 | 19519.3 |
| fecr family protein | CD58_RS11195 | Not Available | Positive | 2553360 - 2554286 | 34472.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
