Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CD58_RS11100 | Not Available | Positive | 2535047 - 2535964 | 34077.7 |
| mfs transporter | CD58_RS11105 | Not Available | Positive | 2536217 - 2537398 | 41917.6 |
| voc family protein | CD58_RS11110 | Not Available | Negative | 2537445 - 2538092 | 22769.2 |
| hypothetical protein | CD58_RS31120 | Not Available | Positive | 2538136 - 2538393 | 8629.29 |
| hypothetical protein | CD58_RS31420 | Not Available | Negative | 2538476 - 2539270 | 29976.1 |
| substrate-binding periplasmic protein | CD58_RS11125 | Not Available | Positive | 2539487 - 2540221 | 27459.3 |
| hypothetical protein | CD58_RS11130 | Not Available | Negative | 2540318 - 2540836 | 19035.9 |
| m10 family metallopeptidase c-terminal domain-containing protein | CD58_RS11135 | Not Available | Positive | 2541044 - 2543029 | 69277.5 |
| lysr family transcriptional regulator | CD58_RS11140 | Not Available | Negative | 2543149 - 2544033 | 32240.0 |
| n-acetyl-gamma-glutamyl-phosphate reductase | CD58_RS11145 | Not Available | Positive | 2544148 - 2545071 | 33194.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
