Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine deacetylase | CD58_RS11050 | Not Available | Positive | 2522150 - 2523307 | 41825.4 |
| nad-dependent succinate-semialdehyde dehydrogenase | CD58_RS11055 | Not Available | Positive | 2523562 - 2525019 | 52202.1 |
| cupin domain-containing protein | CD58_RS11060 | Not Available | Negative | 2525748 - 2526455 | 25017.6 |
| gnat family n-acetyltransferase | CD58_RS11065 | Not Available | Negative | 2526497 - 2527354 | 30496.5 |
| 2-hydroxyacid dehydrogenase | CD58_RS11070 | Not Available | Negative | 2527579 - 2528505 | 34450.6 |
| 4-aminobutyrate--2-oxoglutarate transaminase | CD58_RS11075 | Not Available | Positive | 2528791 - 2530083 | 46275.0 |
| had family hydrolase | CD58_RS11080 | Not Available | Positive | 2530175 - 2530831 | 24514.4 |
| lrp/asnc family transcriptional regulator | CD58_RS11085 | Not Available | Positive | 2530877 - 2531365 | 18513.5 |
| hybrid sensor histidine kinase/response regulator | CD58_RS11090 | Not Available | Negative | 2531381 - 2533561 | 80685.8 |
| alpha/beta fold hydrolase | CD58_RS11095 | Not Available | Negative | 2533717 - 2534670 | 34148.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
