Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CD58_RS11000 | Not Available | Positive | 2510561 - 2511445 | 32947.7 |
| haloacid dehalogenase type ii | CD58_RS11005 | Not Available | Positive | 2511912 - 2512580 | 25017.0 |
| nad(p)/fad-dependent oxidoreductase | CD58_RS11010 | Not Available | Positive | 2512617 - 2513891 | 45475.6 |
| abc transporter substrate-binding protein | CD58_RS11015 | Not Available | Positive | 2513978 - 2515621 | 59653.0 |
| abc transporter permease | CD58_RS11020 | Not Available | Positive | 2515665 - 2516621 | 33919.6 |
| abc transporter permease | CD58_RS11025 | Not Available | Positive | 2516618 - 2517493 | 30675.0 |
| abc transporter atp-binding protein | CD58_RS11030 | Not Available | Positive | 2517495 - 2519339 | 65874.9 |
| (2fe-2s)-binding protein | CD58_RS11035 | Not Available | Positive | 2519336 - 2519644 | 11257.7 |
| nad(p)/fad-dependent oxidoreductase | CD58_RS11040 | Not Available | Positive | 2519626 - 2521002 | 48809.2 |
| nad(p)/fad-dependent oxidoreductase | CD58_RS11045 | Not Available | Positive | 2520999 - 2522153 | 41946.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
