Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease/exonuclease/phosphatase family protein | CD58_RS10950 | Not Available | Negative | 2500448 - 2501401 | 35862.2 |
| nramp family divalent metal transporter | CD58_RS10955 | Not Available | Positive | 2501627 - 2502928 | 47389.7 |
| voc family protein | CD58_RS10960 | Not Available | Positive | 2502997 - 2503476 | 17061.2 |
| rida family protein | CD58_RS10965 | Not Available | Negative | 2504516 - 2504917 | 14754.5 |
| lysr family transcriptional regulator | CD58_RS10970 | Not Available | Positive | 2505062 - 2505991 | 34466.7 |
| cpbp family intramembrane glutamic endopeptidase | CD58_RS10975 | Not Available | Positive | 2505988 - 2506725 | 26501.8 |
| gfa family protein | CD58_RS10980 | Not Available | Positive | 2506797 - 2507219 | 15692.4 |
| aldehyde dehydrogenase family protein | CD58_RS10985 | Not Available | Negative | 2507194 - 2508654 | 51416.8 |
| rida family protein | CD58_RS10990 | Not Available | Negative | 2508953 - 2509339 | 13613.3 |
| dsd1 family plp-dependent enzyme | CD58_RS10995 | Not Available | Negative | 2509329 - 2510465 | 40623.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
