Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS00665 | Not Available | Negative | 140390 - 140977 | 21201.2 |
| hypothetical protein | CD58_RS00670 | Not Available | Negative | 140994 - 141605 | 21924.5 |
| vwa domain-containing protein | CD58_RS00675 | Not Available | Positive | 141826 - 143499 | 60259.5 |
| rna polymerase sigma factor | CD58_RS00680 | Not Available | Positive | 143674 - 144246 | 21758.7 |
| hypothetical protein | CD58_RS00685 | Not Available | Positive | 144243 - 144860 | 22172.0 |
| hypothetical protein | CD58_RS00690 | Not Available | Positive | 144973 - 145332 | 13208.9 |
| abi family protein | CD58_RS00695 | Not Available | Negative | 145643 - 146257 | 23019.3 |
| Trna-arg | Not Available | Not Available | Positive | 146657 - 146733 | Not Available |
| nadp-dependent succinate-semialdehyde dehydrogenase | CD58_RS00705 | Not Available | Positive | 147083 - 148525 | 51464.9 |
| 4-aminobutyrate--2-oxoglutarate transaminase | CD58_RS00710 | Not Available | Positive | 148698 - 149975 | 44863.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
