Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CD58_RS10900 | Not Available | Negative | 2490820 - 2491734 | 33558.4 |
| metal abc transporter atp-binding protein | CD58_RS10905 | Not Available | Positive | 2491835 - 2492706 | 31822.3 |
| mbl fold metallo-hydrolase | CD58_RS10910 | Not Available | Negative | 2492636 - 2493481 | 30573.1 |
| glxa family transcriptional regulator | CD58_RS10915 | Not Available | Positive | 2493571 - 2494539 | 34931.5 |
| glutathione-regulated potassium-efflux system protein kefc | CD58_RS10920 | Not Available | Negative | 2494546 - 2496372 | 65692.3 |
| glutathione-regulated potassium-efflux system oxidoreductase keff | CD58_RS10925 | Not Available | Negative | 2496374 - 2496895 | 19720.4 |
| sensor histidine kinase | CD58_RS10930 | Not Available | Negative | 2496997 - 2498343 | 49782.0 |
| response regulator | CD58_RS10935 | Not Available | Negative | 2498340 - 2499050 | 26726.5 |
| vacj family lipoprotein | CD58_RS10940 | Not Available | Positive | 2499406 - 2500194 | 27748.0 |
| hypothetical protein | CD58_RS10945 | Not Available | Positive | 2500187 - 2500423 | 9260.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
