Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter atp-binding protein | CD58_RS10850 | Not Available | Negative | 2480445 - 2481431 | 35495.9 |
| gfo/idh/moca family protein | CD58_RS10855 | Not Available | Positive | 2481607 - 2482773 | 41797.1 |
| sugar phosphate isomerase/epimerase family protein | CD58_RS10860 | Not Available | Positive | 2482770 - 2483867 | 40650.9 |
| nucleoside permease | CD58_RS10865 | Not Available | Positive | 2483949 - 2485181 | 44784.5 |
| polysaccharide lyase family 7 protein | CD58_RS10870 | Not Available | Negative | 2485208 - 2485864 | 24164.0 |
| hypothetical protein | CD58_RS10875 | Not Available | Positive | 2486122 - 2486457 | 12051.5 |
| l-lactate permease | CD58_RS10880 | Not Available | Negative | 2486610 - 2488373 | 62729.6 |
| thioesterase family protein | CD58_RS10885 | Not Available | Negative | 2488606 - 2489157 | 21331.1 |
| rida family protein | CD58_RS10890 | Not Available | Negative | 2489422 - 2489802 | 13422.0 |
| sos response-associated peptidase family protein | CD58_RS10895 | Not Available | Negative | 2489921 - 2490583 | 24394.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
