Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6388 family protein | CD58_RS10800 | Not Available | Negative | 2471458 - 2471787 | 12449.7 |
| hypothetical protein | CD58_RS10805 | Not Available | Negative | 2471790 - 2472044 | 9409.3 |
| hypothetical protein | CD58_RS10810 | Not Available | Positive | 2472188 - 2472538 | 12331.7 |
| gnat family n-acetyltransferase | CD58_RS10815 | Not Available | Negative | 2472668 - 2473096 | 16337.3 |
| gamma-glutamyltransferase | CD58_RS10820 | Not Available | Positive | 2473257 - 2474984 | 61401.2 |
| cysteine hydrolase family protein | CD58_RS10825 | Not Available | Positive | 2475025 - 2475558 | 19160.0 |
| cap domain-containing protein | CD58_RS10830 | Not Available | Negative | 2475709 - 2476569 | 30980.8 |
| eama family transporter | CD58_RS10835 | Not Available | Negative | 2476761 - 2477723 | 33700.5 |
| sensor histidine kinase | CD58_RS10840 | Not Available | Positive | 2477941 - 2479071 | 40858.8 |
| smp-30/gluconolactonase/lre family protein | CD58_RS10845 | Not Available | Positive | 2479167 - 2480258 | 39674.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
