Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter atp-binding protein | CD58_RS10750 | Not Available | Positive | 2463205 - 2464529 | 47911.4 |
| fluoride efflux transporter crcb | CD58_RS10755 | Not Available | Positive | 2464526 - 2464900 | 13054.4 |
| serine--trna ligase | CD58_RS10760 | Not Available | Positive | 2464916 - 2466196 | 47079.2 |
| siroheme synthase cysg | CD58_RS10765 | Not Available | Positive | 2466197 - 2467591 | 49936.3 |
| glutathione s-transferase family protein | CD58_RS10770 | Not Available | Negative | 2467714 - 2468718 | 38286.9 |
| glycosyl transferase family protein | CD58_RS10775 | Not Available | Negative | 2468807 - 2469808 | 37152.7 |
| tuse/dsrc/dsvc family sulfur relay protein | CD58_RS10780 | Not Available | Negative | 2469805 - 2470140 | 12187.7 |
| sulfurtransferase complex subunit tusb | CD58_RS10785 | Not Available | Negative | 2470137 - 2470430 | 10590.4 |
| sulfurtransferase complex subunit tusc | CD58_RS10790 | Not Available | Negative | 2470430 - 2470792 | 12630.3 |
| sulfurtransferase complex subunit tusd | CD58_RS10795 | Not Available | Negative | 2470792 - 2471184 | 14131.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
