Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | CD58_RS10650 | Not Available | Positive | 2438475 - 2440397 | 69078.4 |
| isocitrate lyase | CD58_RS10655 | Not Available | Negative | 2440507 - 2441832 | 48529.2 |
| secretin n-terminal domain-containing protein | CD58_RS10660 | Not Available | Negative | 2442334 - 2443095 | 27600.4 |
| gnat family n-acetyltransferase | CD58_RS10665 | Not Available | Negative | 2443349 - 2443774 | 15840.9 |
| cupin domain-containing protein | CD58_RS10670 | Not Available | Negative | 2443767 - 2444933 | 43927.1 |
| adenylosuccinate lyase | CD58_RS10675 | Not Available | Negative | 2445017 - 2446387 | 50728.8 |
| high frequency lysogenization protein hfld | CD58_RS10680 | Not Available | Negative | 2446645 - 2447268 | 23117.2 |
| trna 2-thiouridine(34) synthase mnma | CD58_RS10685 | Not Available | Negative | 2447265 - 2448389 | 41686.5 |
| nudix hydrolase | CD58_RS10690 | Not Available | Negative | 2448449 - 2448895 | 16697.7 |
| hypothetical protein | CD58_RS10695 | Not Available | Negative | 2448999 - 2449880 | 32957.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
