Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | CD58_RS10555 | Not Available | Positive | 2416361 - 2418199 | 67912.8 |
| isochorismate family cysteine hydrolase ycac | CD58_RS10560 | Not Available | Positive | 2418347 - 2418976 | 23111.6 |
| lysr family transcriptional regulator | CD58_RS10565 | Not Available | Positive | 2419240 - 2420118 | 32488.2 |
| hemerythrin domain-containing protein | CD58_RS10570 | Not Available | Negative | 2420174 - 2420650 | 18032.7 |
| nad(p)/fad-dependent oxidoreductase | CD58_RS10575 | Not Available | Negative | 2420848 - 2421957 | 39244.2 |
| gnat family n-acetyltransferase | CD58_RS10580 | Not Available | Positive | 2422277 - 2422744 | 17175.8 |
| nadh-quinone oxidoreductase subunit nuon | CD58_RS10585 | Not Available | Negative | 2422876 - 2424339 | 51870.2 |
| nadh-quinone oxidoreductase subunit m | CD58_RS10590 | Not Available | Negative | 2424347 - 2425879 | 55652.4 |
| nadh-quinone oxidoreductase subunit l | CD58_RS10595 | Not Available | Negative | 2425919 - 2427772 | 66552.6 |
| nadh-quinone oxidoreductase subunit nuok | CD58_RS10600 | Not Available | Negative | 2427769 - 2428077 | 10982.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
