Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic ring-hydroxylating oxygenase subunit alpha | CD58_RS10455 | Not Available | Negative | 2392467 - 2393720 | 46777.0 |
| lysr substrate-binding domain-containing protein | CD58_RS10460 | Not Available | Negative | 2393862 - 2394800 | 35305.5 |
| tetr/acrr family transcriptional regulator | CD58_RS10465 | Not Available | Positive | 2395069 - 2395773 | 26548.4 |
| pyrroline-5-carboxylate reductase family protein | CD58_RS10470 | Not Available | Positive | 2395763 - 2396548 | 27125.8 |
| nadh:flavin oxidoreductase | CD58_RS10475 | Not Available | Negative | 2396636 - 2398672 | 75134.7 |
| glycine betaine abc transporter substrate-binding protein | CD58_RS10480 | Not Available | Positive | 2399164 - 2400066 | 33337.1 |
| dimethylsulfonioproprionate lyase family protein | CD58_RS10485 | Not Available | Positive | 2400209 - 2400856 | 23520.1 |
| dmt family transporter | CD58_RS10490 | Not Available | Positive | 2400920 - 2401786 | 31031.1 |
| methyl-accepting chemotaxis protein | CD58_RS10495 | Not Available | Negative | 2401929 - 2403872 | 69756.4 |
| glxa family transcriptional regulator | CD58_RS10500 | Not Available | Positive | 2404161 - 2405204 | 38139.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
