Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | CD58_RS00620 | Not Available | Positive | 127893 - 130373 | 92265.5 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | CD58_RS00625 | Not Available | Positive | 130386 - 132383 | 74672.6 |
| poly-beta-1,6-n-acetyl-d-glucosamine synthase | CD58_RS00630 | Not Available | Positive | 132385 - 133740 | 51677.6 |
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | CD58_RS00635 | Not Available | Positive | 133737 - 134243 | 19021.3 |
| fad-dependent oxidoreductase | CD58_RS00640 | Not Available | Negative | 134428 - 135960 | 55647.4 |
| ybhb/ybcl family raf kinase inhibitor-like protein | CD58_RS00645 | Not Available | Positive | 136099 - 136659 | 19758.6 |
| hypothetical protein | CD58_RS31175 | Not Available | Positive | 136773 - 136946 | 6208.18 |
| metal abc transporter atp-binding protein | CD58_RS00650 | Not Available | Positive | 136986 - 138298 | 47845.0 |
| lysr family transcriptional regulator | CD58_RS00655 | Not Available | Negative | 138308 - 139186 | 32215.7 |
| zinc-dependent alcohol dehydrogenase family protein | CD58_RS00660 | Not Available | Positive | 139294 - 140295 | 34598.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
