Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | CD58_RS10405 | Not Available | Negative | 2380329 - 2381327 | 37937.1 |
| aldehyde dehydrogenase family protein | CD58_RS10410 | Not Available | Negative | 2381415 - 2382893 | 53066.3 |
| voc family protein | CD58_RS10415 | Not Available | Negative | 2382960 - 2383805 | 31944.4 |
| bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase | CD58_RS10420 | Not Available | Negative | 2383828 - 2385474 | 60374.2 |
| iclr family transcriptional regulator | CD58_RS10425 | Not Available | Negative | 2385496 - 2386317 | 30574.3 |
| fumarylacetoacetate hydrolase family protein | CD58_RS10430 | Not Available | Negative | 2386321 - 2387172 | 31229.5 |
| carotenoid oxygenase family protein | CD58_RS10435 | Not Available | Negative | 2387426 - 2388874 | 53939.9 |
| mfs transporter | CD58_RS10440 | Not Available | Negative | 2388910 - 2390091 | 40762.5 |
| transporter | CD58_RS10445 | Not Available | Negative | 2390148 - 2391140 | 36253.4 |
| hybrid-cluster nad(p)-dependent oxidoreductase | CD58_RS10450 | Not Available | Negative | 2391321 - 2392457 | 40992.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
