Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bama | CD58_RS10355 | Not Available | Negative | 2366425 - 2368791 | 86706.3 |
| response regulator transcription factor | CD58_RS10360 | Not Available | Positive | 2369016 - 2369702 | 25333.8 |
| atp-binding protein | CD58_RS10365 | Not Available | Positive | 2369699 - 2370958 | 46131.0 |
| hypothetical protein | CD58_RS10370 | Not Available | Positive | 2371066 - 2371515 | 16452.5 |
| response regulator | CD58_RS10375 | Not Available | Negative | 2371537 - 2372220 | 25425.9 |
| sensor histidine kinase efflux regulator baes | CD58_RS10380 | Not Available | Negative | 2372224 - 2373642 | 52548.3 |
| efflux rnd transporter periplasmic adaptor subunit | CD58_RS10385 | Not Available | Positive | 2373755 - 2374948 | 41953.0 |
| efflux rnd transporter permease subunit | CD58_RS10390 | Not Available | Positive | 2374951 - 2378097 | 110875.0 |
| efflux transporter outer membrane subunit | CD58_RS10395 | Not Available | Positive | 2378094 - 2379491 | 50146.6 |
| class i sam-dependent methyltransferase | CD58_RS10400 | Not Available | Negative | 2379540 - 2380211 | 24336.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
