Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | CD58_RS10305 | Not Available | Negative | 2355061 - 2355666 | 21955.4 |
| atp-nad kinase family protein | CD58_RS10310 | Not Available | Positive | 2355828 - 2356994 | 40981.3 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpa | CD58_RS10315 | Not Available | Positive | 2357029 - 2358432 | 50792.8 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpb | CD58_RS10320 | Not Available | Positive | 2358429 - 2359985 | 57439.4 |
| acyl-coa synthetase | CD58_RS10325 | Not Available | Positive | 2360120 - 2361742 | 59694.9 |
| tautomerase family protein | CD58_RS10330 | Not Available | Positive | 2361947 - 2362162 | 8100.65 |
| dsba family oxidoreductase | CD58_RS10335 | Not Available | Positive | 2362159 - 2362815 | 24318.0 |
| sdr family nad(p)-dependent oxidoreductase | CD58_RS10340 | Not Available | Positive | 2362859 - 2363572 | 24702.6 |
| dknyy domain-containing protein | CD58_RS10345 | Not Available | Negative | 2363700 - 2365709 | 76786.0 |
| hypothetical protein | CD58_RS10350 | Not Available | Negative | 2366034 - 2366297 | 10311.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
