Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS10255 | Not Available | Negative | 2346754 - 2347059 | 10766.0 |
| threonine--trna ligase | CD58_RS10260 | Not Available | Positive | 2347432 - 2349354 | 72576.6 |
| translation initiation factor if-3 | CD58_RS10265 | Not Available | Positive | 2349354 - 2349905 | 20892.7 |
| 50s ribosomal protein l35 | CD58_RS10270 | Not Available | Positive | 2349966 - 2350160 | 7368.38 |
| 50s ribosomal protein l20 | CD58_RS10275 | Not Available | Positive | 2350191 - 2350547 | 13314.6 |
| phenylalanine--trna ligase subunit alpha | CD58_RS10280 | Not Available | Positive | 2350657 - 2351673 | 38030.7 |
| phenylalanine--trna ligase subunit beta | CD58_RS10285 | Not Available | Positive | 2351710 - 2354088 | 86736.2 |
| integration host factor subunit alpha | CD58_RS10290 | Not Available | Positive | 2354092 - 2354394 | 11476.8 |
| merr family transcriptional regulator | CD58_RS10295 | Not Available | Positive | 2354375 - 2354731 | 13921.0 |
| Trna-pro | Not Available | Not Available | Positive | 2354822 - 2354898 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
