Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein | CD58_RS10205 | Not Available | Positive | 2339072 - 2340625 | 55559.2 |
| abc transporter permease | CD58_RS10210 | Not Available | Positive | 2340622 - 2341599 | 33581.7 |
| laci family dna-binding transcriptional regulator | CD58_RS10215 | Not Available | Positive | 2341603 - 2342622 | 36588.2 |
| ribokinase | CD58_RS10220 | Not Available | Positive | 2342646 - 2343560 | 30648.6 |
| d-ribose pyranase | CD58_RS10225 | Not Available | Positive | 2343557 - 2343961 | 14440.7 |
| nucleoside hydrolase | CD58_RS10230 | Not Available | Positive | 2343991 - 2345019 | 37082.9 |
| hypothetical protein | CD58_RS10235 | Not Available | Negative | 2345066 - 2345263 | 7140.38 |
| hypothetical protein | CD58_RS10240 | Not Available | Positive | 2345396 - 2345701 | 11044.0 |
| i78 family peptidase inhibitor | CD58_RS10245 | Not Available | Positive | 2345867 - 2346184 | 11036.1 |
| cold-shock protein | CD58_RS10250 | Not Available | Negative | 2346253 - 2346465 | 7697.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
