Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine--trna ligase/yqey domain fusion protein | CD58_RS10155 | Not Available | Positive | 2329882 - 2331579 | 64531.9 |
| cysteine--trna ligase | CD58_RS10160 | Not Available | Positive | 2331601 - 2332983 | 51570.4 |
| duf2214 family protein | CD58_RS10165 | Not Available | Positive | 2333284 - 2333739 | 16382.8 |
| carbon storage regulator csra | CD58_RS10170 | Not Available | Negative | 2333938 - 2334132 | 6949.5 |
| spor domain-containing protein | CD58_RS10175 | Not Available | Positive | 2334381 - 2334746 | 12897.5 |
| endonuclease | CD58_RS10180 | Not Available | Negative | 2334904 - 2335593 | 26194.5 |
| duf1654 domain-containing protein | CD58_RS10185 | Not Available | Negative | 2335599 - 2335898 | 11123.2 |
| asparaginase | CD58_RS10190 | Not Available | Negative | 2336058 - 2337146 | 38797.5 |
| hypothetical protein | CD58_RS10195 | Not Available | Positive | 2337476 - 2337922 | 15031.6 |
| sugar abc transporter substrate-binding protein | CD58_RS10200 | Not Available | Positive | 2338057 - 2339013 | 33462.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
