Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease iii | CD58_RS10105 | Not Available | Negative | 2315996 - 2316808 | 30971.7 |
| gnat family n-acetyltransferase | CD58_RS10110 | Not Available | Positive | 2316986 - 2317636 | 24549.3 |
| autotransporter assembly complex protein tama | CD58_RS10115 | Not Available | Positive | 2317702 - 2319429 | 63147.5 |
| translocation/assembly module tamb domain-containing protein | CD58_RS10120 | Not Available | Positive | 2319426 - 2323112 | 131719.0 |
| marr family winged helix-turn-helix transcriptional regulator | CD58_RS10125 | Not Available | Positive | 2323366 - 2323839 | 17443.5 |
| efflux transporter outer membrane subunit | CD58_RS10130 | Not Available | Positive | 2323836 - 2325305 | 52520.9 |
| efflux rnd transporter periplasmic adaptor subunit | CD58_RS10135 | Not Available | Positive | 2325321 - 2326520 | 43181.9 |
| dha2 family efflux mfs transporter permease subunit | CD58_RS10140 | Not Available | Positive | 2326713 - 2328242 | 55127.4 |
| udp-2,3-diacylglucosamine diphosphatase | CD58_RS10145 | Not Available | Negative | 2328362 - 2329132 | 28751.9 |
| peptidylprolyl isomerase | CD58_RS10150 | Not Available | Negative | 2329129 - 2329632 | 18195.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
