Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar transferase | CD58_RS10010 | Not Available | Negative | 2294105 - 2294851 | 28072.3 |
| nad-dependent epimerase | CD58_RS10015 | Not Available | Negative | 2294848 - 2295906 | 39595.0 |
| udp-glucose dehydrogenase family protein | CD58_RS10020 | Not Available | Negative | 2295903 - 2297267 | 49982.2 |
| sulfatase-like hydrolase/transferase | CD58_RS10025 | Not Available | Positive | 2297645 - 2299342 | 63169.8 |
| abc transporter atp-binding protein | CD58_RS10030 | Not Available | Positive | 2299470 - 2300138 | 24272.3 |
| abc transporter permease | CD58_RS10035 | Not Available | Positive | 2300135 - 2302606 | 89684.9 |
| lipocalin-like domain-containing protein | CD58_RS10040 | Not Available | Positive | 2302596 - 2303666 | 39430.4 |
| hypothetical protein | CD58_RS10045 | Not Available | Positive | 2303732 - 2303974 | 9099.41 |
| hypothetical protein | CD58_RS10050 | Not Available | Positive | 2304007 - 2304207 | 7368.17 |
| hcp family type vi secretion system effector | CD58_RS10055 | Not Available | Negative | 2304405 - 2304923 | 19182.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
