Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS09960 | Not Available | Negative | 2281741 - 2283690 | 72121.2 |
| lipopolysaccharide biosynthesis protein | CD58_RS09965 | Not Available | Negative | 2283921 - 2285225 | 46782.6 |
| polysaccharide deacetylase family protein | CD58_RS09970 | Not Available | Negative | 2285222 - 2286238 | 38136.5 |
| glycosyltransferase family 2 protein | CD58_RS09975 | Not Available | Negative | 2286248 - 2287384 | 41778.8 |
| glycosyltransferase | CD58_RS09980 | Not Available | Negative | 2287377 - 2288342 | 36284.1 |
| o-antigen ligase family protein | CD58_RS09985 | Not Available | Negative | 2288339 - 2289709 | 49917.9 |
| glycosyltransferase family 4 protein | CD58_RS09990 | Not Available | Negative | 2289706 - 2290809 | 41274.2 |
| gumc family protein | CD58_RS09995 | Not Available | Negative | 2290806 - 2292398 | 60539.4 |
| polysaccharide biosynthesis/export family protein | CD58_RS10000 | Not Available | Negative | 2292414 - 2293439 | 36724.0 |
| cpsd/capb family tyrosine-protein kinase | CD58_RS10005 | Not Available | Negative | 2293460 - 2294104 | 23377.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
