Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS00570 | Not Available | Positive | 121020 - 121445 | 16019.4 |
| duf1161 domain-containing protein | CD58_RS00575 | Not Available | Negative | 121452 - 121685 | 8427.16 |
| osmc family protein | CD58_RS00580 | Not Available | Negative | 121838 - 122269 | 14927.0 |
| llm class flavin-dependent oxidoreductase | CD58_RS00585 | Not Available | Positive | 122507 - 123508 | 36562.9 |
| duf1161 domain-containing protein | CD58_RS00590 | Not Available | Negative | 123563 - 123784 | 7457.18 |
| dodecin | CD58_RS00595 | Not Available | Negative | 123898 - 124113 | 7934.32 |
| yqjd family protein | CD58_RS00600 | Not Available | Positive | 124269 - 124595 | 11777.0 |
| lysr family transcriptional regulator | CD58_RS00605 | Not Available | Negative | 124568 - 125485 | 33649.4 |
| tryptophan synthase subunit beta | CD58_RS00610 | Not Available | Positive | 125599 - 126831 | 44703.6 |
| tryptophan synthase subunit alpha | CD58_RS00615 | Not Available | Positive | 126831 - 127643 | 28666.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
