Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | CD58_RS09910 | Not Available | Negative | 2268352 - 2270199 | 68480.0 |
| abc transporter atp-binding protein | CD58_RS09915 | Not Available | Positive | 2270597 - 2271691 | 40784.3 |
| abc transporter atp-binding protein | CD58_RS09920 | Not Available | Positive | 2271691 - 2272800 | 41098.4 |
| carbohydrate abc transporter permease | CD58_RS09925 | Not Available | Positive | 2272797 - 2273663 | 32376.1 |
| carbohydrate abc transporter permease | CD58_RS09930 | Not Available | Positive | 2273674 - 2274474 | 29918.2 |
| duf2160 domain-containing protein | CD58_RS09935 | Not Available | Positive | 2274485 - 2274757 | 10106.7 |
| extracellular solute-binding protein | CD58_RS09940 | Not Available | Positive | 2274806 - 2276548 | 64907.5 |
| alpha/beta hydrolase | CD58_RS09945 | Not Available | Negative | 2278837 - 2279778 | 34171.4 |
| gnat family n-acetyltransferase | CD58_RS09950 | Not Available | Negative | 2279914 - 2281050 | 42811.7 |
| metal abc transporter atp-binding protein | CD58_RS09955 | Not Available | Negative | 2281056 - 2281744 | 25272.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
