Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycek/yidq family lipoprotein | CD58_RS09865 | Not Available | Positive | 2261255 - 2261524 | 9551.46 |
| duf2628 domain-containing protein | CD58_RS09870 | Not Available | Negative | 2261656 - 2262084 | 16091.8 |
| hd domain-containing protein | CD58_RS09875 | Not Available | Negative | 2262349 - 2262777 | 15961.1 |
| delta-60 repeat domain-containing protein | CD58_RS09880 | Not Available | Negative | 2262979 - 2264280 | 47003.9 |
| hypothetical protein | CD58_RS31115 | Not Available | Negative | 2264520 - 2264669 | 5477.77 |
| azlc family abc transporter permease | CD58_RS09885 | Not Available | Positive | 2264759 - 2265469 | 25586.8 |
| azld family protein | CD58_RS09890 | Not Available | Positive | 2265466 - 2265774 | 10625.7 |
| hypothetical protein | CD58_RS09895 | Not Available | Negative | 2265837 - 2266043 | 7393.77 |
| mfs transporter | CD58_RS09900 | Not Available | Negative | 2266333 - 2267544 | 43887.8 |
| anti-virulence regulator cigr family protein | CD58_RS09905 | Not Available | Positive | 2267673 - 2268203 | 17547.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
