Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | CD58_RS31660 | Not Available | Positive | 2256057 - 2256611 | 21075.2 |
| hypothetical protein | CD58_RS09825 | Not Available | Positive | 2256699 - 2256902 | 7401.87 |
| hypothetical protein | CD58_RS09830 | Not Available | Positive | 2256935 - 2257219 | 10570.6 |
| addiction module antidote protein | CD58_RS09835 | Not Available | Negative | 2257272 - 2257580 | 10959.0 |
| type ii toxin-antitoxin system rele/pare family toxin | CD58_RS09840 | Not Available | Negative | 2257583 - 2257876 | 10560.8 |
| hypothetical protein | CD58_RS09845 | Not Available | Positive | 2258217 - 2258489 | 10088.2 |
| lysr substrate-binding domain-containing protein | CD58_RS09850 | Not Available | Negative | 2259044 - 2259928 | 32217.4 |
| pace efflux transporter | CD58_RS09855 | Not Available | Positive | 2260035 - 2260484 | 16809.7 |
| duf3606 domain-containing protein | CD58_RS29165 | Not Available | Negative | 2260531 - 2260707 | 6548.83 |
| hypothetical protein | CD58_RS09860 | Not Available | Positive | 2260900 - 2261100 | 7151.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
