Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asp | Not Available | Not Available | Positive | 2248130 - 2248206 | Not Available |
| nad(p)/fad-dependent oxidoreductase | CD58_RS09780 | Not Available | Negative | 2248417 - 2249700 | 46523.0 |
| Trna-val | Not Available | Not Available | Positive | 2249885 - 2249961 | Not Available |
| hypothetical protein | CD58_RS09790 | Not Available | Positive | 2250045 - 2250689 | 22812.6 |
| type ii toxin-antitoxin system yafo family toxin | CD58_RS31600 | Not Available | Positive | 2250973 - 2251143 | 6382.78 |
| delta-60 repeat domain-containing protein | CD58_RS09795 | Not Available | Negative | 2251236 - 2252543 | 46693.4 |
| hypothetical protein | CD58_RS09800 | Not Available | Positive | 2253366 - 2253830 | 17510.1 |
| hypothetical protein | CD58_RS09805 | Not Available | Positive | 2253948 - 2254589 | 23287.8 |
| duf2867 domain-containing protein | CD58_RS09810 | Not Available | Negative | 2254714 - 2255250 | 19586.8 |
| dj-1/pfpi family protein | CD58_RS09815 | Not Available | Negative | 2255283 - 2255930 | 23313.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
