Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylanthranilate isomerase | CD58_RS09725 | Not Available | Positive | 2239725 - 2240357 | 22061.6 |
| acetyl-coa carboxylase, carboxyltransferase subunit beta | CD58_RS09730 | Not Available | Positive | 2240613 - 2241533 | 33498.4 |
| bifunctional tetrahydrofolate synthase/dihydrofolate synthase | CD58_RS09735 | Not Available | Positive | 2241530 - 2242837 | 47141.3 |
| spor domain-containing protein | CD58_RS09740 | Not Available | Positive | 2242821 - 2243489 | 23728.5 |
| cvpa family protein | CD58_RS09745 | Not Available | Positive | 2243579 - 2244139 | 19996.8 |
| amidophosphoribosyltransferase | CD58_RS09750 | Not Available | Positive | 2244181 - 2245686 | 55363.2 |
| o-succinylhomoserine sulfhydrylase | CD58_RS09755 | Not Available | Positive | 2245745 - 2246956 | 43152.5 |
| sdr family oxidoreductase | CD58_RS09760 | Not Available | Positive | 2246953 - 2247726 | 27170.6 |
| Trna-val | Not Available | Not Available | Positive | 2247830 - 2247905 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 2247964 - 2248040 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
