Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | CD58_RS09675 | Not Available | Negative | 2224793 - 2228071 | 122155.0 |
| lysr family transcriptional regulator | CD58_RS09680 | Not Available | Negative | 2228139 - 2229029 | 32685.8 |
| 3-isopropylmalate dehydratase large subunit | CD58_RS09685 | Not Available | Positive | 2229186 - 2230604 | 50703.8 |
| 3-isopropylmalate dehydratase small subunit | CD58_RS09690 | Not Available | Positive | 2230616 - 2231260 | 24182.5 |
| class i sam-dependent methyltransferase | CD58_RS09695 | Not Available | Positive | 2231408 - 2232172 | 28071.1 |
| 3-isopropylmalate dehydrogenase | CD58_RS09700 | Not Available | Positive | 2232238 - 2233320 | 38794.9 |
| aspartate-semialdehyde dehydrogenase | CD58_RS09705 | Not Available | Positive | 2233375 - 2234487 | 40420.0 |
| aspartate-semialdehyde dehydrogenase | CD58_RS09710 | Not Available | Positive | 2234741 - 2235751 | 35490.6 |
| fimv/hubp family polar landmark protein | CD58_RS09715 | Not Available | Positive | 2235961 - 2238561 | 91615.7 |
| trna pseudouridine(38-40) synthase trua | CD58_RS09720 | Not Available | Positive | 2238838 - 2239662 | 30919.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
