Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate--trna ligase | CD58_RS09625 | Not Available | Positive | 2218594 - 2220075 | 56269.1 |
| Trna-ala | Not Available | Not Available | Positive | 2220222 - 2220297 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 2220377 - 2220452 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 2220506 - 2220581 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 2220659 - 2220734 | Not Available |
| tetr/acrr family transcriptional regulator | CD58_RS09650 | Not Available | Positive | 2220917 - 2221456 | 19171.1 |
| alpha/beta fold hydrolase | CD58_RS09655 | Not Available | Positive | 2221485 - 2222318 | 30182.3 |
| acyl-coa thioesterase | CD58_RS09660 | Not Available | Positive | 2222364 - 2222813 | 17207.5 |
| trna dihydrouridine synthase | CD58_RS09665 | Not Available | Positive | 2223058 - 2224017 | 35163.8 |
| hsp20 family protein | CD58_RS09670 | Not Available | Positive | 2224135 - 2224587 | 16546.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
