Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter family protein | CD58_RS09575 | Not Available | Positive | 2207438 - 2208754 | 45500.4 |
| methyl-accepting chemotaxis protein | CD58_RS09580 | Not Available | Positive | 2208981 - 2210660 | 59520.8 |
| trna 5-hydroxyuridine modification protein yegq | CD58_RS09585 | Not Available | Negative | 2210833 - 2212158 | 49674.5 |
| ai-2e family transporter | CD58_RS09590 | Not Available | Positive | 2212305 - 2213366 | 39208.6 |
| hypothetical protein | CD58_RS09595 | Not Available | Negative | 2213363 - 2213545 | 6282.81 |
| hypothetical protein | CD58_RS09600 | Not Available | Negative | 2213634 - 2213828 | 7263.93 |
| Trna-asn | Not Available | Not Available | Positive | 2214074 - 2214149 | Not Available |
| hypothetical protein | CD58_RS09610 | Not Available | Positive | 2214383 - 2214610 | 7870.21 |
| amino acid aminotransferase | CD58_RS09615 | Not Available | Negative | 2214825 - 2216021 | 43333.6 |
| excinuclease abc subunit uvrb | CD58_RS09620 | Not Available | Positive | 2216354 - 2218369 | 75987.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
