Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid racemase | CD58_RS09525 | Not Available | Positive | 2197458 - 2198981 | 54922.0 |
| cytosine deaminase | CD58_RS09530 | Not Available | Negative | 2199045 - 2200292 | 46068.1 |
| cytosine permease | CD58_RS09535 | Not Available | Negative | 2200305 - 2201576 | 44974.1 |
| alpha/beta fold hydrolase | CD58_RS09540 | Not Available | Negative | 2201852 - 2202682 | 31042.9 |
| 6-carboxytetrahydropterin synthase qued | CD58_RS09545 | Not Available | Negative | 2202915 - 2203271 | 13625.3 |
| hypothetical protein | CD58_RS09550 | Not Available | Negative | 2203355 - 2204434 | 39576.9 |
| pepsy domain-containing protein | CD58_RS09555 | Not Available | Positive | 2204601 - 2204909 | 11365.3 |
| pepsy domain-containing protein | CD58_RS09560 | Not Available | Positive | 2204909 - 2205220 | 11680.2 |
| response regulator transcription factor | CD58_RS09565 | Not Available | Positive | 2205220 - 2205888 | 24793.8 |
| sensor histidine kinase | CD58_RS09570 | Not Available | Positive | 2205885 - 2207198 | 48882.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
