Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dna modification/repair radical sam protein | CD58_RS09475 | Not Available | Positive | 2186598 - 2187815 | 45143.5 |
| tigr03915 family putative dna repair protein | CD58_RS09480 | Not Available | Positive | 2187809 - 2188645 | 32154.4 |
| wg repeat-containing protein | CD58_RS09485 | Not Available | Negative | 2188661 - 2190814 | 80091.9 |
| cysteine hydrolase family protein | CD58_RS09490 | Not Available | Positive | 2191075 - 2191761 | 24285.2 |
| lysr family transcriptional regulator | CD58_RS09495 | Not Available | Positive | 2191768 - 2192655 | 32146.6 |
| hypothetical protein | CD58_RS09500 | Not Available | Positive | 2193300 - 2193575 | 10002.1 |
| metal-sensing transcriptional repressor | CD58_RS09505 | Not Available | Positive | 2193822 - 2194109 | 10808.9 |
| nickel/cobalt efflux protein rcna | CD58_RS09510 | Not Available | Positive | 2194117 - 2194959 | 30385.0 |
| lysr substrate-binding domain-containing protein | CD58_RS09515 | Not Available | Negative | 2194972 - 2195925 | 35616.4 |
| dicarboxylate/amino acid:cation symporter | CD58_RS09520 | Not Available | Positive | 2196152 - 2197447 | 46175.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
