Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase | CD58_RS00520 | Not Available | Negative | 110404 - 111135 | 26576.8 |
| pa0069 family radical sam protein | CD58_RS00525 | Not Available | Negative | 111351 - 112409 | 39557.8 |
| tyrosine-protein phosphatase | CD58_RS00530 | Not Available | Positive | 112606 - 113286 | 24818.6 |
| m3 family metallopeptidase | CD58_RS00535 | Not Available | Negative | 113228 - 115279 | 77438.3 |
| yhev family putative zinc ribbon protein | CD58_RS00540 | Not Available | Negative | 115394 - 115672 | 10049.1 |
| oligopeptidase a | CD58_RS00545 | Not Available | Negative | 115669 - 117720 | 75820.3 |
| gamma carbonic anhydrase family protein | CD58_RS00550 | Not Available | Positive | 117820 - 118365 | 19513.6 |
| had family hydrolase | CD58_RS00555 | Not Available | Positive | 118530 - 119180 | 24603.2 |
| aminopeptidase | CD58_RS00560 | Not Available | Negative | 119416 - 120507 | 41722.9 |
| hypothetical protein | CD58_RS00565 | Not Available | Positive | 120567 - 120980 | 15303.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
