Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CD58_RS09435 | Not Available | Negative | 2178287 - 2178907 | 21964.7 |
| vacj family lipoprotein | CD58_RS09440 | Not Available | Positive | 2179111 - 2179800 | 25460.2 |
| two-component system response regulator rssb | CD58_RS09445 | Not Available | Positive | 2180146 - 2181327 | 43364.4 |
| anti-sigma factor antagonist rssc | CD58_RS09450 | Not Available | Positive | 2181327 - 2181809 | 17742.4 |
| transaldolase | CD58_RS09455 | Not Available | Negative | 2182026 - 2182952 | 33856.5 |
| trna dihydrouridine(20/20a) synthase dusa | CD58_RS09460 | Not Available | Negative | 2183131 - 2184126 | 36420.1 |
| hypothetical protein | CD58_RS30165 | Not Available | Positive | 2184401 - 2184592 | 7141.04 |
| metallophosphoesterase | CD58_RS09465 | Not Available | Negative | 2184832 - 2185566 | 27384.5 |
| putative adenosine monophosphate-protein transferase fic | CD58_RS09470 | Not Available | Negative | 2185658 - 2186257 | 22594.8 |
| yhfg family protein | CD58_RS30170 | Not Available | Negative | 2186257 - 2186427 | 6311.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
