Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | CD58_RS09385 | Not Available | Negative | 2169314 - 2170036 | 26679.3 |
| pilz domain-containing protein | CD58_RS09390 | Not Available | Negative | 2170033 - 2170629 | 22333.8 |
| lipoprotein-releasing abc transporter permease subunit | CD58_RS09395 | Not Available | Positive | 2170724 - 2171974 | 45437.3 |
| lipoprotein-releasing abc transporter atp-binding protein lold | CD58_RS09400 | Not Available | Positive | 2171982 - 2172665 | 24616.0 |
| lipoprotein-releasing abc transporter permease subunit | CD58_RS09405 | Not Available | Positive | 2172729 - 2173973 | 44449.1 |
| heavy metal sensor histidine kinase | CD58_RS09410 | Not Available | Negative | 2174135 - 2175493 | 49951.8 |
| heavy metal response regulator transcription factor | CD58_RS09415 | Not Available | Negative | 2175490 - 2176170 | 25387.9 |
| plastocyanin/azurin family copper-binding protein | CD58_RS09420 | Not Available | Positive | 2176328 - 2176849 | 18640.6 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | CD58_RS09425 | Not Available | Positive | 2176911 - 2177741 | 30769.6 |
| duf4404 family protein | CD58_RS09430 | Not Available | Negative | 2177914 - 2178177 | 9900.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
