Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | DF41 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1314978 bp
Thymine Count
1310668 bp
Guanine Count
2010915 bp
Cytosine Count
2015833 bp
Genome Length
6652396 bp
Protein-coding Genes
5688 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | CD58_RS09335 | Not Available | Positive | 2153833 - 2154540 | 26068.0 |
| beta-n-acetylhexosaminidase | CD58_RS09340 | Not Available | Positive | 2154715 - 2155713 | 35892.2 |
| s-methyl-5'-thioinosine phosphorylase | CD58_RS09345 | Not Available | Positive | 2155725 - 2156468 | 26349.5 |
| dead/deah box helicase | CD58_RS09350 | Not Available | Negative | 2156634 - 2159327 | 102111.0 |
| csiv family protein | CD58_RS09355 | Not Available | Negative | 2159339 - 2159905 | 20721.8 |
| transcription-repair coupling factor | CD58_RS09360 | Not Available | Negative | 2159916 - 2163365 | 128423.0 |
| glyceraldehyde-3-phosphate dehydrogenase | CD58_RS09365 | Not Available | Positive | 2163534 - 2164997 | 53330.8 |
| mfs transporter | CD58_RS09370 | Not Available | Negative | 2165152 - 2166450 | 46186.2 |
| fad:protein fmn transferase | CD58_RS09375 | Not Available | Positive | 2166676 - 2167665 | 35941.2 |
| si-specific nad(p)(+) transhydrogenase | CD58_RS09380 | Not Available | Positive | 2167877 - 2169271 | 50744.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
